PortEco : Expression

PortEco: Expression holds post-publication microarray gene expression data from E. coli experiments. Our goal is to provide free access to all published E. coli expression data. If you would like to use PortEco: Expression to share your expression data, please contact us.

Many of the search items below require a search term. Some of the queries expect a gene locus term such as ’lacZ' (without the quotes). Wildcard characters, '*' and '%' may also be used. For example ’lac*' (without quotes).

Genes

Conditions

Profiles

Cluster My Genes

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samples, cluster.

Experiments

Publications

Samples

Analyze

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enter the analysis pipeline

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Array Data

News:

May 26, 2011: We are in the process of migrating published E. coli microarray data into PortEco: Expression. Currently we have 1518 published microarrays from 67 publications. For more information about our import plans, please refer to our progress page.

Recent publication:

Singh A, Karimpour-Fard A, Gill RT (2010): Increased mutation frequency in redox-impaired Escherichia coli due to RelA- and RpoS-mediated repression of DNA repair. Appl Environ Microbiol 76(16):5463-70

The Stanford Microarray Database is funded by grant 5R01HG003469-05 from NIH/NHGRI

To cite SMD, please refer to:
Hubble J, Demeter J, Jin H, Mao M, Nitzberg M, Reddy TB, Wymore F, Zachariah ZK, Sherlock G, Ball CA. Implementation of GenePattern within the Stanford Microarray Database. Nucleic Acids Res 2009 Jan 1;37(Database Issue):D898-901
Full text | PubMed